A B C D E F G H I J K L M N O P Q R S T U V W

A

addApplication(Application) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

Add an application.

addArgument(Argument<Value>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Add an argument to the end of the arguments list.

addComponent(VariableOrConstant) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

Add a single component to the end of the components list.

addInput(Input) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Add a single input to the inputs.

addListener(LoggingQueue.Listener<T>) - Method in class uk.ac.ncl.cs.instantsoap.queue.LoggingQueue

Add a listener to the queue.

addOutput(Output) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Add an output to the outputs.

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.APIApplicationConfigurator

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIDispatcherConfigurator

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIMapStrategyConfigurator

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIStringProcessorConfigurator

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringDispatcherConfigurator

afterPropertiesSet() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringMapProcessorConfigurator

APIApplicationConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

Configurator that uses an applications list file.

APIApplicationConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.APIApplicationConfigurator

APIApplicationConfigurator(CommandLineProcessor) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.APIApplicationConfigurator

Application - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec

A template, describing a command.

Application() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Create a new application with inputs and outputs set to empty maps, and other properties set to null.

Application(MetaData, CommandFormat, CommandLine<VariableExpression>, Set<Input>, Set<Output>) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Create a new application with all properties set to the given values.

ApplicationConfigurationException - Exception in uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec

An Application object is miss-configured in a way that is guaranteed to lead to failure.

ApplicationConfigurationException() - Constructor for exception uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.ApplicationConfigurationException

ApplicationConfigurationException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.ApplicationConfigurationException

ApplicationConfigurationException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.ApplicationConfigurationException

ApplicationConfigurationException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.ApplicationConfigurationException

ApplicationDisplayHelper - Class in uk.ac.ncl.cs.instantsoap.webapp

Has re-useable code for displaying parts of the Application class

ApplicationDisplayHelper() - Constructor for class uk.ac.ncl.cs.instantsoap.webapp.ApplicationDisplayHelper

Applications - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec

Static utility class for working with applications.

ApplicationUpload - Class in uk.ac.ncl.cs.instantsoap.webapp

Simple bean to represent the application upload form data.

ApplicationUpload() - Constructor for class uk.ac.ncl.cs.instantsoap.webapp.ApplicationUpload

Argument<Value> - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine

A command-line argument - either an Option or a Parameter.

Argument() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Argument

Argument.ArgumentVisitor<Value> - Interface in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine

Visitor interface so that you can avoid instanceof checks.

asMap(Wsapi.Pair<K, V>...) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

asSet(E...) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

associate(UUID, UUID) - Method in class uk.ac.ncl.cs.instantsoap.IDManager

AsynchronousServiceDispatcher - Interface in uk.ac.ncl.cs.instantsoap.servicedp

Invoke a job specification asynchronously.

AsynchronousServiceDispatcherImpl - Class in uk.ac.ncl.cs.instantsoap.servicedp.impl

A simple implementation of AsynchronousServiceDispatcher that delegates all the hard work on to a StartegyDispatcher.

AsynchronousServiceDispatcherImpl(StrategyDispatcher, JobManager) - Constructor for class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

AsynchronousServiceDispatcherImpl.StrategyDispatcherListenerImpl - Class in uk.ac.ncl.cs.instantsoap.servicedp.impl

StrategyDispatcherListener is implemented as an inner class.

AsynchronousServiceDispatcherImpl.StrategyDispatcherListenerImpl(UUID) - Constructor for class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl.StrategyDispatcherListenerImpl

averageTaskTime(TimeUnit) - Method in interface uk.ac.ncl.cs.instantsoap.queue.QosMonitor

Return the average time taken to process each task.

B

BlockedInvocationClient - Class in <Unnamed>

BlockedInvocationClient() - Constructor for class BlockedInvocationClient

BlockedInvocationResponse - Class in uk.ac.ncl.cs.instantsoap.wsapi

Response from a potentially blocking invocation.

BlockedInvocationResponse() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

Make an empty instance.

BlockedInvocationResponse(UUID, Map<String, String>) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

Make an instance with the information provided.

blockedInvocationResponse(UUID, Map<String, String>) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

blockedInvocationResponse(UUID, Wsapi.Pair<String, String>...) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

BobAppender - Class in example

BobAppender() - Constructor for class example.BobAppender

C

Client - Class in <Unnamed>

Client() - Constructor for class Client

CommandExecutionStrategy - Interface in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution

Compute a Result from a Command.

CommandFormat - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat

Formatting control for converting command-line options into strings.

CommandFormat() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Make a new instance with all properties set to null.

CommandFormat(String, String, boolean, boolean) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Make a new instance with the properties set to the supplied values.

CommandFormatter - Interface in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat

Format a commandline using a command format.

CommandLine<Value> - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine

The data needed to construct a command-line.

CommandLine() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Create a new instance with an empty list of arguments and a null executable and working directory.

CommandLine(String, String, List<Argument<Value>>) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Create a new instance with the specified property values.

CommandLine(String, String, Argument<Value>...) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Create a new instance with the specified property values.

commandLine(String, String, List<Argument<Value>>) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLines

commandLine(String, String, Argument<Value>...) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLines

CommandLineProcessor - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor

A MapProcessor that executes command-line applications.

CommandLineProcessor(CommandExecutionStrategy, ParameterRenamer, CommandFormatter) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

Construct a new command line processor with the specified configuration objects.

CommandLines - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine

Static utility methods for working with command-lines.

completed(T, Date) - Method in interface uk.ac.ncl.cs.instantsoap.queue.LoggingQueue.Listener

configure(InstantSoapConfigurationBean) - Method in class uk.ac.ncl.cs.instantsoap.t2.InstantSoapActivity

Constant - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables

A constant value.

Constant() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

Create a new constant with no value.

Constant(String) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

Create a new constant with the given value.

constant(String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

createDispatcher() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

D

dbFactory - Variable in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

dBuilder - Variable in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

debug(String) - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

DefaultFormatter - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat

Simplest application of a format to a list of arguments.

DefaultFormatter() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.DefaultFormatter

delete() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

delete() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Delete any resources associated with with this job.

deRegisterHandler(MapProcessor) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

deRegisterHandler(StrategyDispatcher) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

describeApplication() - Method in class example.BobAppender

describeApplication(String) - Method in class example.DivMod

describeApplication() - Method in class example.SimpleMath

describeApplication() - Method in class example.StringAppender

describeApplication() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

describeApplication(String) - Method in interface uk.ac.ncl.cs.instantsoap.mapprocessor.MapProcessor

Describe an application.

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

describeApplication(String) - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.AsynchronousServiceDispatcher

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.QueuedDispatcher

describeApplication(String) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

describeApplication() - Method in interface uk.ac.ncl.cs.instantsoap.stringprocessor.StringProcessor

Describe this string transformation application.

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

describeApplication() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

describeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

describeApplication(String) - Method in interface uk.ac.ncl.cs.instantsoap.wsapi.WebServiceDispatcher

Describe an application.

dispatch(StrategyDispatcherListener) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher.ValidatedJob

Dispatch the jobManager, informing sdl.

displayApplicationXML(PrintWriter, Application) - Static method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationDisplayHelper

displayHowMany(PrintWriter, String, String) - Static method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationDisplayHelper

displayInputOrOutput(JspWriter, HttpSession, String, String) - Static method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationDisplayHelper

displayMetaData(JspWriter, HttpSession, String, String) - Static method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationDisplayHelper

displayOption(PrintWriter, HttpSession, String, String, String, String) - Static method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationDisplayHelper

displayVariableExpression(PrintWriter, HttpSession, String, String, String, String) - Static method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationDisplayHelper

displayXML(Document) - Static method in class uk.ac.ncl.cs.instantsoap.test.JaxbTester

DivMod - Class in example

DivMod() - Constructor for class example.DivMod

E

EchoingMapProcessor - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

A service that echoes inputs to outputs.

EchoingMapProcessor() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

EchoingMapProcessor(String, Set<MetaData>) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

EchoingStringProcessor - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

An implementation of StringProcessor that echoes the input string to the output.

EchoingStringProcessor() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

EchoingStringProcessor(String) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

ensureApplication() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

entry - Variable in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyMap

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaDatas

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

equals(Object) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.UUID

example - package example

execute(CommandFormatter, CommandFormat, CommandLine<String>, Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution.CommandExecutionStrategy

Execute a command.

execute(CommandFormatter, CommandFormat, CommandLine<String>, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution.ExecuteLocally

execute(String, String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Execute a particular entry point in a module.

execute(Map, IProcessorTask) - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapTask

executeAsynch(Map<String, EntityIdentifier>, AsynchronousActivityCallback) - Method in class uk.ac.ncl.cs.instantsoap.t2.InstantSoapActivity

ExecuteLocally - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution

A default implementation of a CommandExecutionStrategy that uses Process.exec().

ExecuteLocally() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution.ExecuteLocally

executeR(Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

EXIT_STATUS_KEY - Static variable in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution.ExecuteLocally

ExternalPythonProcessorConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

Expose python scripts to an InstantsSOAP stack.

ExternalPythonProcessorConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

F

FileJob - Class in uk.ac.ncl.cs.instantsoap.job.impl

A Job that stores the result in files.

FileJob(String) - Constructor for class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

FileJobFactory - Class in uk.ac.ncl.cs.instantsoap.job.impl

Created by IntelliJ IDEA.

FileJobFactory(String) - Constructor for class uk.ac.ncl.cs.instantsoap.job.impl.FileJobFactory

format(CommandFormat, List<Argument<String>>) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormatter

Convert a command format and a list of string arguments into a list of strings making up all of the individual components of a command line.

format(CommandFormat, List<Argument<String>>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.DefaultFormatter

G

generateId() - Static method in class uk.ac.ncl.cs.instantsoap.ShortIdGenerator

generatePorts() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

getApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

Get an application by name.

getApplication() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

getApplication() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

getApplication() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

Get the application name.

getApplicationMetaData() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Get the application meta-data.

getApplicationName() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessorFactory

getApplicationName() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

getApplicationXML() - Method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationUpload

getArguments() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Get the arguments list.

getAsyncDispatcher() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

getClient(URL, String) - Static method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClientUtils

getCommandFormat() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Get the application command format.

getCommandLine() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Get the commandline pattern that must be filled out to execute this application.

getComponents() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

Get the components of this expression.

getConfiguration() - Method in class uk.ac.ncl.cs.instantsoap.t2.InstantSoapActivity

getDefaults() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapScavengerHelper

getDescription() - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

getDescription() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Get the description attribute.

getDescriptionText() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

getDispatcher() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIDispatcherConfigurator

getDispatcher() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringDispatcherConfigurator

getEndpoint() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

getEndpoint() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessorFactory

getEndpoint() - Method in class uk.ac.ncl.cs.instantsoap.t2.InstantSoapConfigurationBean

getExecutable() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Get the name of the executable.

getExecutePy() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Get the python execution script name.

getExecutionResult(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.AsynchronousServiceDispatcher

Return the result of the jobManager.

getExecutionResult(UUID) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

getExecutor() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

getExecutor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

getExecutor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

getExtraPythonPaths() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Get all of the extra python paths that should be searched when scanning for modules.

getFailureReason() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

getFailureReason(UUID) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

getFailureReason() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Get the reason for failure.

getFailureReason(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Get the reason for failure for the job associated with the id.

getFromModel(ScuflModel) - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapScavengerHelper

getIcon() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapScavengerHelper

getInput() - Method in class example.BobAppender

getInput() - Method in class example.SimpleMath

getInput() - Method in class example.StringAppender

getInput() - Method in interface uk.ac.ncl.cs.instantsoap.stringprocessor.StringProcessor

Describe the single input.

getInput() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

getInputs(String) - Method in class example.DivMod

getInputs() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Get the inputs for this application.

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

getInputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.mapprocessor.MapProcessor

Get the inputs assocaited with an application.

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

getInputs() - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

getInputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.AsynchronousServiceDispatcher

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.QueuedDispatcher

getInputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

getInputs(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

getInputs() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

Get the inputs for this job spec.

getInputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.wsapi.WebServiceDispatcher

Describe the inputs of an application.

getInputStreamForRScript(Class, String) - Method in class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

getInstantPyLocation() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Get the python driver directory.

getIntrospectPy() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Get the name of the python introspection script.

getInvocationState() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

getInvocationState(UUID) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

getInvocationState() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Get the invocation state.

getInvocationState(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Get the invocation state associated with the id.

getJobExecutionEndTime() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

getJobExecutionEndTime(UUID) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

getJobExecutionEndTime() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Get the time the job ended to be executed.

getJobExecutionEndTime(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Get the execution end time for the job associated with the id.

getJobExecutionStartTime() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

getJobExecutionStartTime(UUID) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

getJobExecutionStartTime() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Get the time the job started to be executed.

getJobExecutionStartTime(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Get the submission time for the job associated with the id.

getJobSpecification() - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher.ValidatedJob

The jobManager specification that was validated.

getJobStatus() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Get the job status.

getJobSubmissionTime() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

getJobSubmissionTime(UUID) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

getJobSubmissionTime() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Get the job submition time.

getJobSubmissionTime(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Get the submission time for the job associated with the id.

getLastRetrieval() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

getLastRetrieval() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Get the last time the results where retrieved.

getLetter() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Get the short name of this option.

getListener(ScavengerTree) - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapScavengerHelper

getLongName() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Get the long name of this option.

getLongPrefix() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Get the long prefix string.

getMapProcessor() - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

Get the processor that is currently handling requests.

getMetaData() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

Get the meta-data associated with this input, including the public name.

getMetaData() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

Get the meta-data describing this output.

getModule() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

getName() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

Get the name of this variable.

getName() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Get the name attribute.

getOutputs() - Method in class example.BobAppender

getOutputs(String) - Method in class example.DivMod

getOutputs() - Method in class example.SimpleMath

getOutputs() - Method in class example.StringAppender

getOutputs() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Get the outputs for this application.

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

getOutputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.mapprocessor.MapProcessor

Get the outputs assocaited with an application.

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

getOutputs() - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

getOutputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.AsynchronousServiceDispatcher

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.QueuedDispatcher

getOutputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

getOutputs() - Method in interface uk.ac.ncl.cs.instantsoap.stringprocessor.StringProcessor

Describe the single output.

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

getOutputs() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

getOutputs(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

getOutputs(String) - Method in interface uk.ac.ncl.cs.instantsoap.wsapi.WebServiceDispatcher

Describe the outputs of an application.

getProcessor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.APIApplicationConfigurator

getProcessor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

getProcessor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

getProcessor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIMapStrategyConfigurator

getProcessor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIStringProcessorConfigurator

getProcessor() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringMapProcessorConfigurator

getProcessorClass() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessorFactory

getProcessorDescription() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessorFactory

getProperties() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

getPythonShell() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Get the python shell.

getRDriverName() - Method in class uk.ac.ncl.cs.instantsoap.r.RDataFrameProcessor

getRDriverName() - Method in class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

getRegisteredApps() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

getRenameFrom() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

Get the internal name for the output.

getRenameTo() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

Get the internal name of the input, or NULL if it doesn't need renaming.

getResult() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

getResult(UUID) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

getResult() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Get the results data.

getResult(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Get the results of the job associated with the id.

getResults() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

Get the results map.

getResults() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Get the results for this response.

getRScriptName() - Method in class uk.ac.ncl.cs.instantsoap.r.RDataFrameProcessor

getScavengerDescription() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapScavengerHelper

getSearchLocation() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

getSearchLocation() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

getSemanticAnnotation() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Get the semantic annotation.

getShortPrefix() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Get the sort prefx string.

getSlots() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

getStringProcessor() - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

Get the string processor that this delegates all calls on to.

getSuffix() - Method in class example.SimpleMath

getSuffix() - Method in class example.StringAppender

getToolName() - Method in class uk.ac.ncl.cs.instantsoap.t2.InstantSoapConfigurationBean

getUnit() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Get the time unit specifying how to interpret the wait.

getUuid() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

Get the uuid of this response.

getUuid() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Get the uuid of the job assicoated with this response.

getUuid() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.UUID

getValue() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

Get the value.

getValue() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

Get the constant value.

getValues() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Get the value list.

getWait() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Get the new wait time.

getWorkingDir() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Get the working directory for native commands launched through this executor.

getWorkingDirectory() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Get the working directory that the application will run relative to.

H

handle(Option<Value>) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Argument.ArgumentVisitor

Handle the case of an option.

handle(Parameter<Value>) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Argument.ArgumentVisitor

Handle the case of a parameter.

handle(Variable) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableOrConstant.VariableOrConstantVisitor

Handle a variable.

handle(Constant) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableOrConstant.VariableOrConstantVisitor

Handle a constant.

handlesApplication(String) - Method in class example.DivMod

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

handlesApplication(String) - Method in interface uk.ac.ncl.cs.instantsoap.mapprocessor.MapProcessor

Indicates if this processor can handle applications with a particuar name.

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.QueuedDispatcher

handlesApplication(String) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

handlesApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaDatas

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

hashCode() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.UUID

I

IDManager<UUID> - Class in uk.ac.ncl.cs.instantsoap

Manage potentially complex forrests of IDs.

IDManager() - Constructor for class uk.ac.ncl.cs.instantsoap.IDManager

IDManager.Visitor<UUID> - Interface in uk.ac.ncl.cs.instantsoap

IllegalInvocationStateException - Exception in uk.ac.ncl.cs.instantsoap.servicedp

An invocation has been made for a resource that is not in an appropriate state for the invocation.

IllegalInvocationStateException() - Constructor for exception uk.ac.ncl.cs.instantsoap.servicedp.IllegalInvocationStateException

IllegalInvocationStateException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.servicedp.IllegalInvocationStateException

IllegalInvocationStateException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.servicedp.IllegalInvocationStateException

IllegalInvocationStateException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.servicedp.IllegalInvocationStateException

input(String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

input(MetaData) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

input(MetaData, String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

input(String, String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

Input - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec

A single input parameter.

Input() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

Create a new input with all properties set to null.

Input(MetaData, String) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

Create a new input with the provided values.

InstantSoapActivity - Class in uk.ac.ncl.cs.instantsoap.t2

An Activity providing InstantSoap functionality.

InstantSoapActivity() - Constructor for class uk.ac.ncl.cs.instantsoap.t2.InstantSoapActivity

InstantSoapClient - Class in uk.ac.ncl.cs.instantsoap.client

InstantSoapClient(String[]) - Constructor for class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

InstantSoapClientUtils - Class in uk.ac.ncl.cs.instantsoap.client

InstantSoapClientUtils() - Constructor for class uk.ac.ncl.cs.instantsoap.client.InstantSoapClientUtils

InstantSoapConfigurationBean - Class in uk.ac.ncl.cs.instantsoap.t2

Configuration information for the InstantSoap activity.

InstantSoapConfigurationBean(String, String) - Constructor for class uk.ac.ncl.cs.instantsoap.t2.InstantSoapConfigurationBean

InstantSoapConfigurationBean() - Constructor for class uk.ac.ncl.cs.instantsoap.t2.InstantSoapConfigurationBean

InstantSoapProcessor - Class in uk.ac.ncl.cs.instantsoap.t1

Processor for InstantSoap.

InstantSoapProcessor(ScuflModel, String, String, String) - Constructor for class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

InstantSoapProcessorFactory - Class in uk.ac.ncl.cs.instantsoap.t1

ProcessorFactory for InstantSoap.

InstantSoapProcessorFactory(String, String) - Constructor for class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessorFactory

InstantSoapProcessorInfoBean - Class in uk.ac.ncl.cs.instantsoap.t1

Information bean for InstantSoap.

InstantSoapProcessorInfoBean() - Constructor for class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessorInfoBean

InstantSoapScavenger - Class in uk.ac.ncl.cs.instantsoap.t1

Scavenger for InstantSoap.

InstantSoapScavenger(String) - Constructor for class uk.ac.ncl.cs.instantsoap.t1.InstantSoapScavenger

InstantSoapScavengerHelper - Class in uk.ac.ncl.cs.instantsoap.t1

Scavenger helper for InstantSoap.

InstantSoapScavengerHelper() - Constructor for class uk.ac.ncl.cs.instantsoap.t1.InstantSoapScavengerHelper

InstantSoapTask - Class in uk.ac.ncl.cs.instantsoap.t1

The task that actually services requests.

InstantSoapTask(Processor) - Constructor for class uk.ac.ncl.cs.instantsoap.t1.InstantSoapTask

IntrospectingClient - Class in <Unnamed>

IntrospectingClient() - Constructor for class IntrospectingClient

introspectScript(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Introspect all of the instantsoap entry points in the named module.

InvalidJobSpecificationException - Exception in uk.ac.ncl.cs.instantsoap.wsapi

Indicates either the application specified is invalid or the data to be processed is invalid.

InvalidJobSpecificationException() - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.InvalidJobSpecificationException

InvalidJobSpecificationException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.InvalidJobSpecificationException

InvalidJobSpecificationException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.InvalidJobSpecificationException

InvalidJobSpecificationException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.InvalidJobSpecificationException

InvocationState - Enum in uk.ac.ncl.cs.instantsoap.servicedp

The state of an invocation.

invoke() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

invoke(JobSpecification) - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.AsynchronousServiceDispatcher

Invoke the jobManager.

invoke(JobSpecification) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

invoke(JobSpecification) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.SynchronousServiceDispatcherImpl

invoke(JobSpecification) - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.SynchronousServiceDispatcher

Invoke the invocation, blocking the calling thread.

invoke(WebServiceDispatcher, JobSpecification) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

invokeAndBlock() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

invokeAndBlock(JobSpecification) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

invokeAndBlock(JobSpecification) - Method in interface uk.ac.ncl.cs.instantsoap.wsapi.WebServiceDispatcher

Invoke the jobManager, and return the result.

invokeNonBlocking() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

invokeNonBlocking(JobSpecification) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

invokeNonBlocking(JobSpecification) - Method in interface uk.ac.ncl.cs.instantsoap.wsapi.WebServiceDispatcher

Invoke the jobManager, returning immediately.

invokeNonBlockingAndBlock(WebServiceDispatcher, JobSpecification, String) - Static method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClientUtils

isFailure() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

isFailure(UUID) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

isFailure() - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

True if the job has resulted in failure, false otherwise.

isFailure(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Return true if the job associated with the uuid has failed.

isMergeOptionsIfEmpty() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Find out if empty options should be merged.

isPreferShortPrefix() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Find out if short prefixes are preferred over long ones.

isQueued(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.queue.QueueMonitor

Discover if a particular job is queued up.

J

JaxbBaseTest - Class in uk.ac.ncl.cs.instantsoap.test

Helpful test functionality for jaxb serialization.

JaxbBaseTest() - Constructor for class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

jaxbClasses() - Method in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

JaxbFriendlyEntry - Class in uk.ac.ncl.cs.instantsoap.wsapi.jaxb

Entry in a jaxb-friendly map.

JaxbFriendlyEntry() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyEntry

JaxbFriendlyEntry(Map.Entry<String, String>) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyEntry

JaxbFriendlyMap - Class in uk.ac.ncl.cs.instantsoap.wsapi.jaxb

A map-like class that is friendly to jaxb.

JaxbFriendlyMap() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyMap

JaxbFriendlyMap(Map<String, String>) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyMap

JaxbTester - Class in uk.ac.ncl.cs.instantsoap.test

Standard tests to perform for jaxb things.

JaxbTester() - Constructor for class uk.ac.ncl.cs.instantsoap.test.JaxbTester

jContext - Variable in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

Job - Interface in uk.ac.ncl.cs.instantsoap.job

Interesting state about a pending, executing or completed job.

jobCompletedSuccessfully(Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl.StrategyDispatcherListenerImpl

jobCompletedSuccessfully(Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcherListener

Notification that the job has completed successfully.

JobExecutionException - Exception in uk.ac.ncl.cs.instantsoap.wsapi

There was a problem that prevented the job from being able to run.

JobExecutionException() - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.JobExecutionException

JobExecutionException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.JobExecutionException

JobExecutionException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.JobExecutionException

JobExecutionException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.JobExecutionException

JobFactory - Interface in uk.ac.ncl.cs.instantsoap.job

Factory for creating Job instances.

jobFailed(Throwable) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl.StrategyDispatcherListenerImpl

jobFailed(Throwable) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcherListener

Notification that the job has failed.

JobManager - Interface in uk.ac.ncl.cs.instantsoap.job

Manage jobs, their statuses and data associated with them.

JobManagerImpl - Class in uk.ac.ncl.cs.instantsoap.job.impl

Manage a set of jobs.

JobManagerImpl(JobFactory, ScheduledExecutorService) - Constructor for class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

jobRate(TimeUnit) - Method in interface uk.ac.ncl.cs.instantsoap.queue.QosMonitor

Return the job rate in the specified unit of time.

JobSpecification - Class in uk.ac.ncl.cs.instantsoap.wsapi

Specifies an application to run and the input values to give it.

JobSpecification(String, Map<String, String>) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

Create a new job specification, with the provided details.

JobSpecification() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

Create a new instance with all properties set to null.

jobSpecification(String, Map<String, String>) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

jobSpecification(String, Wsapi.Pair<String, String>...) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

jobsPending() - Method in interface uk.ac.ncl.cs.instantsoap.queue.QueueMonitor

Retrieve the number of pending jobs.

jobStarted() - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl.StrategyDispatcherListenerImpl

jobStarted() - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcherListener

Notification that the job has started.

JobStatus - Enum in uk.ac.ncl.cs.instantsoap.wsapi

Job status.

K

key - Variable in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyEntry

key - Variable in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi.Pair

L

listApplications() - Method in class example.DivMod

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

listApplications() - Method in interface uk.ac.ncl.cs.instantsoap.mapprocessor.MapProcessor

List all of the applications handled, by name.

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

listApplications() - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.AsynchronousServiceDispatcher

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.QueuedDispatcher

listApplications() - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

listApplications() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

listApplications() - Method in interface uk.ac.ncl.cs.instantsoap.wsapi.WebServiceDispatcher

List all of the applications known by this service.

listInputs() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

listOutputs() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

loggingDispatcher(WebServiceDispatcher) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

loggingHandler(WebServiceDispatcher) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

LoggingQueue<T> - Class in uk.ac.ncl.cs.instantsoap.queue

A queue that runs runnables and informs listeners.

LoggingQueue(CompletionService<T>) - Constructor for class uk.ac.ncl.cs.instantsoap.queue.LoggingQueue

Create a new queue that uses the CompeltionService to run jobs.

LoggingQueue.Listener<T> - Interface in uk.ac.ncl.cs.instantsoap.queue

A Listener that is informed when things are submitted to or completed by the list.

M

main(String[]) - Static method in class BlockedInvocationClient

main(String[]) - Static method in class Client

main(String[]) - Static method in class IntrospectingClient

main(String[]) - Static method in class NonblockedInvocationClient

main(String[]) - Static method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

Map2StringProcessor - Class in uk.ac.ncl.cs.instantsoap.stringprocessor

A MapProcessor that delegates on to a StringProcessor.

Map2StringProcessor(StringProcessor) - Constructor for class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

Create a new map processor that wraps the provided string processor.

MapAdapter - Class in uk.ac.ncl.cs.instantsoap.wsapi.jaxb

Convince jaxb that it wants to handle maps.

MapAdapter() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.MapAdapter

MapProcessor - Interface in uk.ac.ncl.cs.instantsoap.mapprocessor

An arbitrary function encapsulated as a transform from one XML document to another.

MapStrategyDispatcher - Class in uk.ac.ncl.cs.instantsoap.mapprocessor

A strategy dispatcher that delegates on to a DomProcessor.

MapStrategyDispatcher(MapProcessor) - Constructor for class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

Create a new instance, delegating to the processor.

marshal(Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.MapAdapter

marshal(Set<String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.SetAdapter

marshaller - Variable in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

marshalUnmarshalValue(T) - Method in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

marshalUnmarshalValue(DocumentBuilder, Marshaller, Unmarshaller, T) - Static method in class uk.ac.ncl.cs.instantsoap.test.JaxbTester

marshalValue(T) - Method in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

marshalValue(DocumentBuilder, Marshaller, T) - Static method in class uk.ac.ncl.cs.instantsoap.test.JaxbTester

MetaData - Class in uk.ac.ncl.cs.instantsoap.wsapi

Information describing an application, an input or output, or other entities.

MetaData() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Create a new instance with null values for all properties.

MetaData(String) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Create a new instance with the given name.

MetaData(String, String) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Create a new instance with the given name and description.

MetaData(String, String, Object) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Create a new instance with the given name, description and semantic annotation.

metaData(String) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

metaData(String, String) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

metaData(String, String, Object) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

MissingInstantSoapException - Exception in uk.ac.ncl.cs.instantsoap.t1

Exception to indicate that the InstantSoap installation is missing, or otherwise inaccessible.

MissingInstantSoapException() - Constructor for exception uk.ac.ncl.cs.instantsoap.t1.MissingInstantSoapException

MissingInstantSoapException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.t1.MissingInstantSoapException

MissingInstantSoapException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.t1.MissingInstantSoapException

MissingInstantSoapException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.t1.MissingInstantSoapException

Monitors - Class in uk.ac.ncl.cs.instantsoap.queue

Static utilities for working with queues.

Monitors() - Constructor for class uk.ac.ncl.cs.instantsoap.queue.Monitors

MultiplexingMapProcessor - Class in uk.ac.ncl.cs.instantsoap.mapprocessor

Multiplex over a set of map processors.

MultiplexingMapProcessor(Set<MapProcessor>) - Constructor for class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

Create a new processor that multiplexes over the supplied processors.

MultiplexingMapProcessor() - Constructor for class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

MultiplexingStrategyDispatcher - Class in uk.ac.ncl.cs.instantsoap.strategydp.impl

Delegate handling jobs on to a range of handlers.

MultiplexingStrategyDispatcher() - Constructor for class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

MultiplexingStrategyDispatcher(Set<StrategyDispatcher>) - Constructor for class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

N

newJob() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJobFactory

newJob() - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

newJob() - Method in interface uk.ac.ncl.cs.instantsoap.job.JobFactory

Create a brand new job.

newJob() - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Create a new Job and return the corresponding UUID.

NonblockedInvocationClient - Class in <Unnamed>

NonblockedInvocationClient() - Constructor for class NonblockedInvocationClient

NonBlockingInvocationResponse - Class in uk.ac.ncl.cs.instantsoap.wsapi

The return value for a non-blocking, synchronous invocation.

NonBlockingInvocationResponse() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Create a new instance with all fields set to null.

NonBlockingInvocationResponse(UUID, int, TimeUnit) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Create a new instance in the JobPending state.

NonBlockingInvocationResponse(UUID, Map<String, String>) - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Create a new instance in the JobCompleted state.

O

OperationUnavailableException - Exception in uk.ac.ncl.cs.instantsoap.wsapi

This exception indicates that for some reason the service can not handle jobs submitted temporarily.

OperationUnavailableException() - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.OperationUnavailableException

OperationUnavailableException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.OperationUnavailableException

OperationUnavailableException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.OperationUnavailableException

OperationUnavailableException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.OperationUnavailableException

option(String, String, List<Value>) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLines

option(String, String, Value...) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLines

option(String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLines

Option<Value> - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine

Command-line option.

Option() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Create a new option with an empty list of values.

Option(String, String, List<Value>) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Create a new option with the specified properties.

Option(String, String, Value...) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Create a new option with the specified properties.

output(String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

output(MetaData) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

output(MetaData, String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

output(String, String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

Output - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec

A single output parameter.

Output() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

Make a new output with properties set to null.

Output(MetaData, String) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

Make a new output using the supplied meta-data and rename-from.

P

pair(K, V) - Static method in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi

parameter(Value) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLines

Parameter<Value> - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine

A command-line parameter.

Parameter() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

Create a new parameter with the value set to null.

Parameter(Value) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

Create a new parameter with the given value.

ParameterRenamer - Interface in uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming

A strategy for renaming results.

ParameterRenamerImpl - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming

Simple implementation of ParameterRenamer.

ParameterRenamerImpl() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming.ParameterRenamerImpl

parseCommandLine() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

parseXML(String) - Method in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

parseXML(DocumentBuilder, String) - Static method in class uk.ac.ncl.cs.instantsoap.test.JaxbTester

pollForResult(UUID) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

pollForResult(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.wsapi.WebServiceDispatcher

Poll the jobManager for completion.

pollState(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.servicedp.AsynchronousServiceDispatcher

Poll the state of the invocation.

pollState(UUID) - Method in class uk.ac.ncl.cs.instantsoap.servicedp.impl.AsynchronousServiceDispatcherImpl

printLocationString() - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

printMetadataList(List<MetaData>) - Method in class uk.ac.ncl.cs.instantsoap.client.InstantSoapClient

process(String) - Method in class example.BobAppender

process(String, Map<String, String>) - Method in class example.DivMod

process(String) - Method in class example.SimpleMath

process(String) - Method in class example.StringAppender

process(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

process(String, Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.mapprocessor.MapProcessor

Handle a request.

process(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

process(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

process(String) - Method in class uk.ac.ncl.cs.instantsoap.r.RDataFrameProcessor

process(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

process(String) - Method in interface uk.ac.ncl.cs.instantsoap.stringprocessor.StringProcessor

Process input data.

process(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

process(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

PythonExecutor - Class in uk.ac.ncl.cs.instantsoap.python

Java code to execute Python scripts.

PythonExecutor() - Constructor for class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

PythonProcessor - Class in uk.ac.ncl.cs.instantsoap.python

PythonProcessor() - Constructor for class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

PythonProcessorConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

Expose python scripts to an InstantsSOAP stack.

PythonProcessorConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

Q

qosMonitor(LoggingQueue<UUID>) - Static method in class uk.ac.ncl.cs.instantsoap.queue.Monitors

QosMonitor - Interface in uk.ac.ncl.cs.instantsoap.queue

Monitor that reports quality of service stats.

QueuedDispatcher - Class in uk.ac.ncl.cs.instantsoap.strategydp.impl

Asynchronously dispatches jobs to an underlying dispatcher, using an ExecutorService to manage the running of the tasks.

QueuedDispatcher(StrategyDispatcher, LoggingQueue<UUID>) - Constructor for class uk.ac.ncl.cs.instantsoap.strategydp.impl.QueuedDispatcher

queueMonitor(LoggingQueue<UUID>) - Static method in class uk.ac.ncl.cs.instantsoap.queue.Monitors

QueueMonitor - Interface in uk.ac.ncl.cs.instantsoap.queue

Monitor to returns stats about what jobs are in the queue.

R

RDataFrameProcessor - Class in uk.ac.ncl.cs.instantsoap.r

Describe class RSimpleProcessor here.

RDataFrameProcessor() - Constructor for class uk.ac.ncl.cs.instantsoap.r.RDataFrameProcessor

readStringFromFile(File) - Method in class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

readStringFromInputStream(InputStream) - Method in class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

rebuild() - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

registerHandler(MapProcessor) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

registerHandler(StrategyDispatcher) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

removeApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

Remove an application by name.

removeArgument(Argument<Value>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Remove the first occurance of an argument from the arguments list.

removeComponent(VariableOrConstant) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

Remove a single component from its first occurance in the conponents list.

removeInput(Input) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Remove a single input from the inputs.

removeListener(LoggingQueue.Listener<T>) - Method in class uk.ac.ncl.cs.instantsoap.queue.LoggingQueue

Remove the listener from the queue.

removeOutput(Output) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Remove an output from the inputs.

renameInputs(Map<String, String>, Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming.ParameterRenamer

Rename inputs from external to internal names.

renameInputs(Map<String, String>, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming.ParameterRenamerImpl

renameOutputs(Map<String, String>, Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming.ParameterRenamer

Rename outputs from internal to external names.

renameOutputs(Map<String, String>, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming.ParameterRenamerImpl

RProcessorBase - Class in uk.ac.ncl.cs.instantsoap.r

Describe class RProcessorBase here.

RProcessorBase() - Constructor for class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

S

ScriptMetaData - Class in uk.ac.ncl.cs.instantsoap.python

Created by IntelliJ IDEA.

ScriptMetaData() - Constructor for class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

ScriptMetaDatas - Class in uk.ac.ncl.cs.instantsoap.python

Created by IntelliJ IDEA.

ScriptMetaDatas() - Constructor for class uk.ac.ncl.cs.instantsoap.python.ScriptMetaDatas

scriptMetaDatas - Variable in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaDatas

SetAdapter - Class in uk.ac.ncl.cs.instantsoap.wsapi.jaxb

Convince jaxb to work with sets.

SetAdapter() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.SetAdapter

setApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

setApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

setApplication(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

Set the application name.

setApplicationMetaData(MetaData) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Set the application meta-data.

setApplicationName(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

setApplicationXML(String) - Method in class uk.ac.ncl.cs.instantsoap.webapp.ApplicationUpload

setArguments(List<Argument<Value>>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Set the arguments list.

setAsyncDispatcher(AsynchronousServiceDispatcher) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

setCommandFormat(CommandFormat) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Set the application command format.

setCommandLine(CommandLine<VariableExpression>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Set the commandline pattern that must be filled out to execute this application.

setComponents(List<VariableOrConstant>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

Set the components list.

setDescription(MetaData) - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

setDescription(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Set the description attribute.

setDispatcher(MultiplexingStrategyDispatcher) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIDispatcherConfigurator

setDispatcher(MultiplexingStrategyDispatcher) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringDispatcherConfigurator

setEndpoint(String) - Method in class uk.ac.ncl.cs.instantsoap.t1.InstantSoapProcessor

setEndpoint(String) - Method in class uk.ac.ncl.cs.instantsoap.t2.InstantSoapConfigurationBean

setExecutable(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Set the name of the executable.

setExecutePy(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Set the python execution script name.

setExecutor(PythonExecutor) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

setExecutor(PythonExecutor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

setExecutor(PythonExecutor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

setExtraPythonPaths(File[]) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Set all of the extra python paths that should be searched when scanning for modules.

setFailure(boolean) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setFailure(UUID, boolean) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

setFailure(boolean) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the job failure status.

setFailure(UUID, boolean) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Update the failure status of the job with the id.

setFailureReason(Throwable) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setFailureReason(UUID, Throwable) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

setFailureReason(Throwable) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the reason for failure.

setFailureReason(UUID, Throwable) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Set the reason for failure for the job associated with the id.

setInputs(Set<Input>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Set the inputs of this application.

setInputs(Set<MetaData>) - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

setInputs(Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

Set the inputs for this job spec.

setInstantPyLocation(File) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Set the python driver directory.

setIntrospectPy(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Set the name of the python introspection script.

setInvocationState(InvocationState) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setInvocationState(UUID, InvocationState) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

setInvocationState(InvocationState) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the invocation state.

setInvocationState(UUID, InvocationState) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Set the invocation state associated with the id.

setJobExecutionEndTime(Date) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setJobExecutionEndTime(UUID, Date) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

setJobExecutionEndTime(Date) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the job execution end time.

setJobExecutionEndTime(UUID, Date) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Set the execution end time for the job associated with the id.

setJobExecutionStartTime(Date) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setJobExecutionStartTime(UUID, Date) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

setJobExecutionStartTime(Date) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the job execution start time.

setJobExecutionStartTime(UUID, Date) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Set the submission time for the job associated with the id.

setJobStatus(JobStatus) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Set the job status.

setJobSubmissionTime(Date) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setJobSubmissionTime(UUID, Date) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

setJobSubmissionTime(Date) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the job submission time.

setJobSubmissionTime(UUID, Date) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Set the submission time for the job associated with the id.

setLastRetrieval(Date) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setLastRetrieval(Date) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the last time the results where retrieved.

setLetter(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Set the short-name of this option.

setLongName(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Set the long name of this option.

setLongPrefix(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Set the long prefix string.

setMergeOptionsIfEmpty(boolean) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Specify if empty options should be merged.

setMetaData(MetaData) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

Set the meta-data associated with this input.

setMetaData(MetaData) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

Set the meta-data describing this output.

setModule(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

setName(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

Set the name of this variable.

setName(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Set the name attribute.

setOutputs(Set<Output>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

Set the outputs fo this application.

setOutputs(Set<MetaData>) - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

setPreferShortPrefix(boolean) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Specify if short prefixes should be preferred over long ones.

setProcessor(CommandLineProcessor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.APIApplicationConfigurator

setProcessor(MultiplexingMapProcessor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

setProcessor(MultiplexingMapProcessor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

setProcessor(MultiplexingMapProcessor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIMapStrategyConfigurator

setProcessor(MultiplexingMapProcessor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIStringProcessorConfigurator

setProcessor(MultiplexingMapProcessor) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringMapProcessorConfigurator

setPythonShell(String) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Set the python shell.

setRenameFrom(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

Set the internal name for the output, or set to null if no renaming should be done.

setRenameTo(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

Set the internal name of the input, or NULL if it doesn't need renaming.

setResult(UUID, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.JobManagerImpl

setResult(UUID, Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.job.JobManager

Set the results of the job associated with the id.

setResults(Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

Set the results map.

setResults(Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Set the results for this response.

setResut(Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.job.impl.FileJob

setResut(Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.job.Job

Set the result data.

setSearchLocations(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.ExternalPythonProcessorConfigurator

setSearchLocations(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.PythonProcessorConfigurator

setSemanticAnnotation(Object) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

Set the semantic annotation.

setShortPrefix(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

Set the short prefix string.

setSlots(Set<MetaData>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

setSuffix(String) - Method in class example.SimpleMath

setSuffix(String) - Method in class example.StringAppender

setToolName(String) - Method in class uk.ac.ncl.cs.instantsoap.t2.InstantSoapConfigurationBean

setUnit(TimeUnit) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Set the time unit specifying how to interpret the wait.

setUpJAXB() - Method in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

setUpXML() - Method in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

setUuid(UUID) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

Set the uuid of this response.

setUuid(UUID) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Set the uuid of the job associated with this response.

setUuid(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.UUID

setValue(Value) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

Set the value.

setValue(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

Set the constant value.

setValues(List<Value>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

Set the value list.

setWait(int) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

Set the wait time.

setWorkingDir(File) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonExecutor

Set the working directory for native commands launched through this executor.

setWorkingDirectory(String) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

Set the working directory that the application will run relative to.

ShortIdGenerator - Class in uk.ac.ncl.cs.instantsoap

Generate short unique IDs.

ShortIdGenerator() - Constructor for class uk.ac.ncl.cs.instantsoap.ShortIdGenerator

SimpleMath - Class in example

SimpleMath() - Constructor for class example.SimpleMath

SPIDispatcherConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

Magik to do provider discovery.

SPIDispatcherConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIDispatcherConfigurator

SPIMapStrategyConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

Magik to do provider discovery.

SPIMapStrategyConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIMapStrategyConfigurator

SPIStringProcessorConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

Magik to do provider discovery.

SPIStringProcessorConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.SPIStringProcessorConfigurator

SpringDispatcherConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

A configurator that uses a spring context to find dispatchers.

SpringDispatcherConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringDispatcherConfigurator

SpringMapProcessorConfigurator - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

A configurator that uses a spring context to find dispatchers.

SpringMapProcessorConfigurator() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.SpringMapProcessorConfigurator

STDERR_KEY - Static variable in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution.ExecuteLocally

STDIN_KEY - Static variable in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution.ExecuteLocally

STDOUT_KEY - Static variable in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution.ExecuteLocally

StrategyDispatcher - Interface in uk.ac.ncl.cs.instantsoap.strategydp

Responsible for routing jobManager specifications to the handler that will process them.

StrategyDispatcher.ValidatedJob - Interface in uk.ac.ncl.cs.instantsoap.strategydp

A validated jobManager.

StrategyDispatcherListener - Interface in uk.ac.ncl.cs.instantsoap.strategydp

The mechanism for finding out how a job is running.

StringAppender - Class in example

StringAppender() - Constructor for class example.StringAppender

StringProcessor - Interface in uk.ac.ncl.cs.instantsoap.stringprocessor

A processor that transforms a String to a String.

submit(Runnable, T) - Method in class uk.ac.ncl.cs.instantsoap.queue.LoggingQueue

Subkit a runnable with a ticket.

submitted(T, Date) - Method in interface uk.ac.ncl.cs.instantsoap.queue.LoggingQueue.Listener

substitute(Map<Variable, Constant>, VariableExpression) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

substitute(Map<Variable, Constant>, List<VariableOrConstant>) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

substitute(Map<Variable, Constant>, VariableOrConstant) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

substitute(Map<Variable, Constant>, CommandLine<VariableExpression>) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

substituteAll(Map<Variable, Constant>, List<VariableExpression>) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

substituteAndStringify(Map<Variable, Constant>, VariableExpression) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

SynchronousServiceDispatcher - Interface in uk.ac.ncl.cs.instantsoap.servicedp

Invoke a job specification synchronously.

SynchronousServiceDispatcherImpl - Class in uk.ac.ncl.cs.instantsoap.servicedp.impl

Created by IntelliJ IDEA.

SynchronousServiceDispatcherImpl(AsynchronousServiceDispatcher) - Constructor for class uk.ac.ncl.cs.instantsoap.servicedp.impl.SynchronousServiceDispatcherImpl

T

toMap() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyMap

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Application

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Input

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Output

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat.CommandFormat

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.CommandLine

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

toString() - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

toString() - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaData

toString() - Method in class uk.ac.ncl.cs.instantsoap.python.ScriptMetaDatas

toString() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.BlockedInvocationResponse

toString() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.JobSpecification

toString() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.MetaData

toString() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.NonBlockingInvocationResponse

toString() - Method in class uk.ac.ncl.cs.instantsoap.wsapi.UUID

U

uk.ac.ncl.cs.instantsoap - package uk.ac.ncl.cs.instantsoap

uk.ac.ncl.cs.instantsoap.client - package uk.ac.ncl.cs.instantsoap.client

uk.ac.ncl.cs.instantsoap.commandlineprocessor - package uk.ac.ncl.cs.instantsoap.commandlineprocessor

Processing and executing command-lines.

uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec - package uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec

Specification for a complete application.

uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution - package uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandExecution

Handle executing command-lines, managing the native process and inputs and outputs.

uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat - package uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandFormat

Formatting command-line data-structures into lists of strings suitable for passing off to Process.exec.

uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine - package uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine

Data-structures for representing command-lines.

uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming - package uk.ac.ncl.cs.instantsoap.commandlineprocessor.parameterRenaming

Map between inputs and outputs as they are in user-land and in the command-line.

uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables - package uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables

Management of expressions involving sequences of variables and constants.

uk.ac.ncl.cs.instantsoap.job - package uk.ac.ncl.cs.instantsoap.job

Job management.

uk.ac.ncl.cs.instantsoap.job.impl - package uk.ac.ncl.cs.instantsoap.job.impl

Implementation classes for jobs.

uk.ac.ncl.cs.instantsoap.mapprocessor - package uk.ac.ncl.cs.instantsoap.mapprocessor

API for exposing computations via a simple Map -> Map transformation.

uk.ac.ncl.cs.instantsoap.python - package uk.ac.ncl.cs.instantsoap.python

uk.ac.ncl.cs.instantsoap.queue - package uk.ac.ncl.cs.instantsoap.queue

Manage queues of jobs.

uk.ac.ncl.cs.instantsoap.r - package uk.ac.ncl.cs.instantsoap.r

uk.ac.ncl.cs.instantsoap.servicedp - package uk.ac.ncl.cs.instantsoap.servicedp

Job dispatching, async and sync.

uk.ac.ncl.cs.instantsoap.servicedp.impl - package uk.ac.ncl.cs.instantsoap.servicedp.impl

Job dispatching implementation.

uk.ac.ncl.cs.instantsoap.strategydp - package uk.ac.ncl.cs.instantsoap.strategydp

Strategies for dispatching job requests.

uk.ac.ncl.cs.instantsoap.strategydp.impl - package uk.ac.ncl.cs.instantsoap.strategydp.impl

Implementations of strategy dispatchers.

uk.ac.ncl.cs.instantsoap.stringprocessor - package uk.ac.ncl.cs.instantsoap.stringprocessor

API for exposing simple String -> String transformations through InstantSOAP.

uk.ac.ncl.cs.instantsoap.t1 - package uk.ac.ncl.cs.instantsoap.t1

uk.ac.ncl.cs.instantsoap.t2 - package uk.ac.ncl.cs.instantsoap.t2

uk.ac.ncl.cs.instantsoap.test - package uk.ac.ncl.cs.instantsoap.test

uk.ac.ncl.cs.instantsoap.webapp - package uk.ac.ncl.cs.instantsoap.webapp

Beans and utilities to support the InstantSOAP web application.

uk.ac.ncl.cs.instantsoap.wsapi - package uk.ac.ncl.cs.instantsoap.wsapi

The web-service interface definitions, exceptions and datatypes.

uk.ac.ncl.cs.instantsoap.wsapi.impl - package uk.ac.ncl.cs.instantsoap.wsapi.impl

Classes that provide the implementation glue to attach the web service API to a spring-managed web-service container.

uk.ac.ncl.cs.instantsoap.wsapi.jaxb - package uk.ac.ncl.cs.instantsoap.wsapi.jaxb

Support code required by jaxb to handle the objects we need to push through the service.

unbound(VariableExpression) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

UnknownApplicationException - Exception in uk.ac.ncl.cs.instantsoap.wsapi

Exception indicating that the application is unknown.

UnknownApplicationException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.UnknownApplicationException

UnknownApplicationException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.UnknownApplicationException

UnknownApplicationException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.UnknownApplicationException

UnknownUuidException - Exception in uk.ac.ncl.cs.instantsoap.wsapi

The UUID is not known.

UnknownUuidException() - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.UnknownUuidException

UnknownUuidException(String) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.UnknownUuidException

UnknownUuidException(String, Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.UnknownUuidException

UnknownUuidException(Throwable) - Constructor for exception uk.ac.ncl.cs.instantsoap.wsapi.UnknownUuidException

unmarshal(JaxbFriendlyMap) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.MapAdapter

unmarshal(ArrayList<String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.SetAdapter

unmarshaller - Variable in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

unmarshalValue(Document) - Method in class uk.ac.ncl.cs.instantsoap.test.JaxbBaseTest

unmarshalValue(Unmarshaller, Document) - Static method in class uk.ac.ncl.cs.instantsoap.test.JaxbTester

unused(Map<Variable, Constant>, VariableExpression) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

UUID - Class in uk.ac.ncl.cs.instantsoap.wsapi

A universally unique ID, used to identify jobs.

UUID() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.UUID

V

validate(String) - Method in class example.BobAppender

validate(String, Map<String, String>) - Method in class example.DivMod

validate(String) - Method in class example.SimpleMath

validate(String) - Method in class example.StringAppender

validate(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.CommandLineProcessor

validate(String, Map<String, String>) - Method in interface uk.ac.ncl.cs.instantsoap.mapprocessor.MapProcessor

Validate the inputs for the application.

validate(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MultiplexingMapProcessor

validate(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.python.PythonProcessor

validate(String) - Method in class uk.ac.ncl.cs.instantsoap.r.RDataFrameProcessor

validate(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.stringprocessor.Map2StringProcessor

validate(String) - Method in interface uk.ac.ncl.cs.instantsoap.stringprocessor.StringProcessor

Check that the input is valid.

validate(String, Map<String, String>) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingMapProcessor

validate(String) - Method in class uk.ac.ncl.cs.instantsoap.wsapi.impl.EchoingStringProcessor

validateApplication(Application) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

validateCommandFormat(CommandFormat) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

validateCommandLine(CommandLine<VariableExpression>) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

validateInput(Input) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

validateJob(JobSpecification) - Method in class uk.ac.ncl.cs.instantsoap.mapprocessor.MapStrategyDispatcher

validateJob(JobSpecification) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.MultiplexingStrategyDispatcher

validateJob(JobSpecification) - Method in class uk.ac.ncl.cs.instantsoap.strategydp.impl.QueuedDispatcher

validateJob(JobSpecification) - Method in interface uk.ac.ncl.cs.instantsoap.strategydp.StrategyDispatcher

Ensure that the jobManager specification can be dispatched.

validateMetaData(MetaData, boolean, boolean, boolean) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

validateOutputs(Output) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.applicationSpec.Applications

value - Variable in class uk.ac.ncl.cs.instantsoap.wsapi.jaxb.JaxbFriendlyEntry

value - Variable in class uk.ac.ncl.cs.instantsoap.wsapi.Wsapi.Pair

valueOf(String) - Static method in enum uk.ac.ncl.cs.instantsoap.servicedp.InvocationState

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum uk.ac.ncl.cs.instantsoap.wsapi.JobStatus

Returns the enum constant of this type with the specified name.

values() - Static method in enum uk.ac.ncl.cs.instantsoap.servicedp.InvocationState

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum uk.ac.ncl.cs.instantsoap.wsapi.JobStatus

Returns an array containing the constants of this enum type, in the order they are declared.

Variable - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables

A variable.

Variable() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

Create a new variable with a null name.

Variable(String) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

Create a new variable with the given name.

variable(String) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

VariableExpression - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables

An expression that contains both variables and constants.

VariableExpression() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

Create a new expression with an empty list of components.

VariableExpression(List<VariableOrConstant>) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

Create a new expression with the provided list of components.

VariableExpression(VariableOrConstant...) - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpression

Create a new expression with the provided components.

variableExpression(List<VariableOrConstant>) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

variableExpression(VariableOrConstant...) - Static method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableExpressions

VariableExpressions - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables

Static utilities for working with variables, constants and variable expressions.

VariableOrConstant - Class in uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables

A variable or a constant.

VariableOrConstant() - Constructor for class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableOrConstant

VariableOrConstant.VariableOrConstantVisitor - Interface in uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables

Visitor callback for VariableOrConstant.

visit(Argument.ArgumentVisitor<Value>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Argument

Visit this argument, triggering the handle method of the visitor specific to the concrete class of the argument.

visit(Argument.ArgumentVisitor<Value>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Option

visit(Argument.ArgumentVisitor<Value>) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.commandLine.Parameter

visit(VariableOrConstant.VariableOrConstantVisitor) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Constant

visit(VariableOrConstant.VariableOrConstantVisitor) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.Variable

visit(VariableOrConstant.VariableOrConstantVisitor) - Method in class uk.ac.ncl.cs.instantsoap.commandlineprocessor.variables.VariableOrConstant

Visit this object, calling the handle method specific to the concrete-class.

visit(UUID) - Method in interface uk.ac.ncl.cs.instantsoap.IDManager.Visitor

visitAssocs(UUID, IDManager.Visitor<UUID>) - Method in class uk.ac.ncl.cs.instantsoap.IDManager

W

WebServiceDispatcher - Interface in uk.ac.ncl.cs.instantsoap.wsapi

The Web Service interface for executing jobs.

WebServiceDispatcherImpl - Class in uk.ac.ncl.cs.instantsoap.wsapi.impl

Implementation of the web service dispatcher, using the strategy dispatcher stack.

WebServiceDispatcherImpl() - Constructor for class uk.ac.ncl.cs.instantsoap.wsapi.impl.WebServiceDispatcherImpl

writeStringToFile(File, String) - Method in class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

writeStringToOutputStream(OutputStream, String) - Method in class uk.ac.ncl.cs.instantsoap.r.RProcessorBase

Wsapi - Class in uk.ac.ncl.cs.instantsoap.wsapi

Static utilities to make working with wsapi objects easier.

Wsapi.Pair<K,V> - Class in uk.ac.ncl.cs.instantsoap.wsapi

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